Back to Build/check report for BioC 3.22:   simplified   long
[A]BCDEFGHIJKLMNOPQRSTUVWXYZ

This page was generated on 2026-01-30 02:31 -0000 (Fri, 30 Jan 2026).

HostnameOSArch (*)R versionInstalled pkgs
bbstest2Linux (Ubuntu 24.04.1 LTS)x86_644.5.0 (2025-04-11) -- "How About a Twenty-Six" 865
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 2/20HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
AnnotationForge 1.51.0  (landing page)
Bioconductor Package Maintainer
Snapshot Date: 2025-05-06 18:16 -0000 (Tue, 06 May 2025)
git_url: https://git.bioconductor.org/packages/AnnotationForge
git_branch: devel
git_last_commit: 0c65828
git_last_commit_date: 2025-04-15 14:14:21 -0000 (Tue, 15 Apr 2025)
bbstest2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    OK  NO, package depends on 'AnnotationDbi' which is not available
See other builds for AnnotationForge in R Universe.


BUILD results for AnnotationForge on bbstest2

To the developers/maintainers of the AnnotationForge package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/AnnotationForge.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: AnnotationForge
Version: 1.51.0
Command: /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data AnnotationForge
StartedAt: 2025-05-06 18:20:18 -0000 (Tue, 06 May 2025)
EndedAt: 2025-05-06 18:22:30 -0000 (Tue, 06 May 2025)
EllapsedTime: 132.2 seconds
RetCode: 0
Status:   OK  
PackageFile: AnnotationForge_1.51.0.tar.gz
PackageFileSize: 3.808 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data AnnotationForge
###
##############################################################################
##############################################################################


* checking for file ‘AnnotationForge/DESCRIPTION’ ... OK
* preparing ‘AnnotationForge’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... OK
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/ARABIDOPSIS.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/ARABIDOPSISCHIP.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/BASEPKG.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/COELICOLOR.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/GO.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/INPARANOID.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/KEGG.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/MALARIA.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/NCBICHIP.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/NCBIORG.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/NOCHIPSCHEMA.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/NOSCHEMA.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/ORGANISM.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/ORTHOLOGY.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/PFAM.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/YEAST.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/YEASTCHIP.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/YEASTNCBI.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/ProbePkg-template/data’ is empty
* building ‘AnnotationForge_1.51.0.tar.gz’